Welcome to modlAMP's documentation! =================================== **modlAMP** .. image:: https://img.shields.io/pypi/v/modlamp.svg :target: https://pypi.org/project/modlamp/ .. image:: https://travis-ci.org/alexarnimueller/modlAMP.svg?branch=master :target: https://travis-ci.org/alexarnimueller/modlAMP .. image:: https://codecov.io/gh/alexarnimueller/modlAMP/branch/master/graph/badge.svg :target: https://codecov.io/gh/alexarnimueller/modlAMP .. image:: https://img.shields.io/badge/License-BSD--3-lightgrey.svg :target: https://github.com/alexarnimueller/modlAMP/blob/master/LICENSE.rst .. image:: https://img.shields.io/badge/DOI-10.1093%2Fbioinformatics%2Fbtx285-ff69b4.svg :target: https://doi.org/10.1093/bioinformatics/btx285 **Authors:** Alex Müller, Gisela Gabernet **Copyright:** (c) 2016 - 2021 ETH Zurich, Switzerland; Alex Müller, Gisela Gabernet, Gisbert Schneider `(modlab) `_. This is a **Python package** (for Python 3 since version 4.0.0) that was designed for working with **peptides**, **proteins** or any sequence of **natural amino acids**. It incorporates several modules, like sequence generation (module ``sequences``), sequence library analysis (module ``analysis``) or descriptor calculation (module ``descriptors``). For basic instructions on how to use the package, check the `README `_ or the `example script `_. The project's GitHub page can be found here: http://github.com/alexarnimueller/modlamp .. toctree:: :caption: The package has the following contents: :maxdepth: 3 :numbered: readme modlamp examplescript license todo **If you use modlAMP in a scientific publication, we would appreciate citations to the following paper:** Müller A. T. *et al.* (2017) modlAMP: Python for anitmicrobial peptides, *Bioinformatics* **33**, (17), 2753-2755, DOI:`10.1093/bioinformatics/btx285 `_. Indices and tables ================== * :ref:`genindex` * :ref:`modindex` * :ref:`search`